HL_7TTU_048

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

7TTU|1|1|A|2057, 7TTU|1|1|A|2058, 7TTU|1|1|G|2059

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_048 not in the Motif Atlas

Geometric match to HL_4WF9_047

Geometric discrepancy: 0.1347

The information below is about HL_4WF9_047

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

7TTU|1|1|G|2054
7TTU|1|1|U|2055
7TTU|1|1|G|2056
7TTU|1|1|A|2057
7TTU|1|1|A|2058
7TTU|1|1|G|2059
7TTU|1|1|A|2060
7TTU|1|1|U|2061
7TTU|1|1|G|2062
7TTU|1|1|C|2063

Current chains

Chain 1

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L21

Chain L

50S ribosomal protein L3

Chain N

50S ribosomal protein L32