HL_7TTU_051

3D structure

PDB id

7TTU (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus (Strain ATCC43300)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

7TTU|1|1|G|2277

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTU_051 not in the Motif Atlas

Geometric match to HL_4WF9_049

Geometric discrepancy: 0.1247

The information below is about HL_4WF9_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

7TTU|1|1|C|2275
7TTU|1|1|U|2276
7TTU|1|1|G|2277
7TTU|1|1|G|2278
7TTU|1|1|G|2279
7TTU|1|1|G|2280
7TTU|1|1|C|2281
7TTU|1|1|G|2282
7TTU|1|1|G|2283

Current chains

Chain 1

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L27

Chain Y

50S ribosomal protein L16