HL_7TTW_038

3D structure

PDB id

7TTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S ribosomal subunit from Staphylococcus aureus containing double mutation in uL3 imparting linezolid resistance

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUGAGAAUU

Length

9 nucleotides

Bulged bases

7TTW|1|1|A|1678

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7TTW_038 not in the Motif Atlas

Geometric match to HL_4WF9_039

Geometric discrepancy: 0.1774

The information below is about HL_4WF9_039

Detailed Annotation

GNRA with extra cWW

Broad Annotation

GNRA with extra cWW

Motif group

HL_45359.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7TTW|1|1|A|1673
7TTW|1|1|U|1674
7TTW|1|1|G|1675
7TTW|1|1|A|1676
7TTW|1|1|G|1677
7TTW|1|1|A|1678
7TTW|1|1|A|1679
7TTW|1|1|U|1680
7TTW|1|1|U|1681

Current chains

Chain 1

23S rRNA

Nearby chains