HL_7U0H_015
3D structure
- PDB id
- 7U0H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- UCUUGAAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7U0H_015 not in the Motif Atlas
- Geometric match to HL_5J7L_015
- Geometric discrepancy: 0.32
- The information below is about HL_5J7L_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7U0H|1|1|U|640
7U0H|1|1|C|641
7U0H|1|1|U|642
7U0H|1|1|U|643
7U0H|1|1|G|644
7U0H|1|1|A|645
7U0H|1|1|A|646
7U0H|1|1|A|647
7U0H|1|1|C|648
7U0H|1|1|A|649
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain e
- 60S ribosomal protein L32
- Chain w
- 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase
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