HL_7U0H_052
3D structure
- PDB id
- 7U0H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- State NE1 nucleolar 60S ribosome biogenesis intermediate - Overall model
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GAUUGUUCACC
- Length
- 11 nucleotides
- Bulged bases
- 7U0H|1|1|U|2921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7U0H_052 not in the Motif Atlas
- Geometric match to HL_4V90_032
- Geometric discrepancy: 0.3457
- The information below is about HL_4V90_032
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_20811.4
- Basepair signature
- cWW-cWS-F
- Number of instances in this motif group
- 14
Unit IDs
7U0H|1|1|G|2918
7U0H|1|1|A|2919
7U0H|1|1|U|2920
7U0H|1|1|U|2921
7U0H|1|1|G|2922
7U0H|1|1|U|2923
7U0H|1|1|U|2924
7U0H|1|1|C|2925
7U0H|1|1|A|2926
7U0H|1|1|C|2927
7U0H|1|1|C|2928
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain V
- 60S ribosomal protein L23-A
- Chain b
- Nucleolar GTP-binding protein 1
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