HL_7UCK_106
3D structure
- PDB id
- 7UCK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GAC(B8N)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 7UCK|1|9|A|1253
- QA status
- Modified nucleotides: B8N
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UCK_106 not in the Motif Atlas
- Homologous match to HL_8P9A_215
- Geometric discrepancy: 0.1099
- The information below is about HL_8P9A_215
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7UCK|1|9|G|1245
7UCK|1|9|A|1246
7UCK|1|9|C|1247
7UCK|1|9|B8N|1248
7UCK|1|9|C|1249
7UCK|1|9|A|1250
7UCK|1|9|A|1251
7UCK|1|9|C|1252
7UCK|1|9|A|1253
7UCK|1|9|C|1254
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain Dd
- 40S ribosomal protein S29
- Chain QQ
- 40S ribosomal protein S16
- Chain UU
- 40S ribosomal protein S20
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