HL_7UG6_012

3D structure

PDB id

7UG6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases

7UG6|1|1|U|545, 7UG6|1|1|C|546

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG6_012 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.326

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81100.2

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

7UG6|1|1|C|544
7UG6|1|1|U|545
7UG6|1|1|C|546
7UG6|1|1|G|547

Current chains

Chain 1

25S rRNA

Nearby chains

Chain H

60S ribosomal protein L9-A