HL_7UG6_054

3D structure

PDB id

7UG6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of pre-60S ribosomal subunit, unmethylated G2922

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

7UG6|1|1|U|2571, 7UG6|1|1|C|2572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG6_054 not in the Motif Atlas

Geometric match to HL_6MSF_001

Geometric discrepancy: 0.2332

The information below is about HL_6MSF_001

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

7UG6|1|1|C|2568
7UG6|1|1|A|2569
7UG6|1|1|U|2570
7UG6|1|1|U|2571
7UG6|1|1|C|2572
7UG6|1|1|G|2573

Current chains

Chain 1

25S rRNA

Nearby chains

Chain Z

60S ribosomal protein L27-A