HL_7UG7_006

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGUAACGGC

Length

9 nucleotides

Bulged bases

7UG7|1|16|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_006 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.0839

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7UG7|1|16|G|259
7UG7|1|16|G|260
7UG7|1|16|U|261
7UG7|1|16|A|262
7UG7|1|16|A|263
7UG7|1|16|C|264
7UG7|1|16|G|265
7UG7|1|16|G|266
7UG7|1|16|C|267

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SQ

30S ribosomal protein S17

Chain ST

30S ribosomal protein S20