HL_7UG7_008

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AACUGAGACACGGU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_008 not in the Motif Atlas

Homologous match to HL_5J7L_008

Geometric discrepancy: 0.0849

The information below is about HL_5J7L_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81205.3

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7UG7|1|16|A|320
7UG7|1|16|A|321
7UG7|1|16|C|322
7UG7|1|16|U|323
7UG7|1|16|G|324
7UG7|1|16|A|325
7UG7|1|16|G|326
7UG7|1|16|A|327
7UG7|1|16|C|328
7UG7|1|16|A|329
7UG7|1|16|C|330
7UG7|1|16|G|331
7UG7|1|16|G|332
7UG7|1|16|U|333

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SP

30S ribosomal protein S16

Chain ST

30S ribosomal protein S20