HL_7UG7_024

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7UG7|1|16|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_024 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.0797

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7UG7|1|16|G|1089
7UG7|1|16|U|1090
7UG7|1|16|U|1091
7UG7|1|16|A|1092
7UG7|1|16|A|1093
7UG7|1|16|G|1094
7UG7|1|16|U|1095
7UG7|1|16|C|1096

Current chains

Chain 16

16S rRNA

Nearby chains

Chain SB

30S ribosomal protein S2

Chain SG

30S ribosomal protein S7

Chain SU

30S ribosomal protein S21