HL_7UG7_056

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_056 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.1318

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7UG7|1|23|C|885
7UG7|1|23|A|886
7UG7|1|23|U|887
7UG7|1|23|C|888
7UG7|1|23|C|889
7UG7|1|23|C|890
7UG7|1|23|G|891

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LE

50S ribosomal protein L5

Chain SS

30S ribosomal protein S19