HL_7UG7_086

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_086 not in the Motif Atlas

Geometric match to HL_5J7L_188

Geometric discrepancy: 0.1108

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UG7|1|23|G|2303
7UG7|1|23|G|2304
7UG7|1|23|U|2305
7UG7|1|23|C|2306
7UG7|1|23|G|2307
7UG7|1|23|G|2308
7UG7|1|23|A|2309
7UG7|1|23|C|2310
7UG7|1|23|A|2311
7UG7|1|23|U|2312
7UG7|1|23|C|2313

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LE

50S ribosomal protein L5