HL_7UG7_097

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7UG7|1|23|G|2751, 7UG7|1|23|C|2755

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_097 not in the Motif Atlas

Geometric match to HL_5J7L_199

Geometric discrepancy: 0.0844

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7UG7|1|23|C|2745
7UG7|1|23|U|2746
7UG7|1|23|G|2747
7UG7|1|23|A|2748
7UG7|1|23|A|2749
7UG7|1|23|A|2750
7UG7|1|23|G|2751
7UG7|1|23|C|2752
7UG7|1|23|A|2753
7UG7|1|23|U|2754
7UG7|1|23|C|2755
7UG7|1|23|U|2756
7UG7|1|23|A|2757
7UG7|1|23|A|2758
7UG7|1|23|G|2759

Current chains

Chain 23

23S rRNA

Nearby chains

Chain LF

50S ribosomal protein L6

Chain LM

50S ribosomal protein L13

Chain Lj

50S ribosomal protein L36