HL_7UG7_110

3D structure

PDB id

7UG7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

(PSU)GCUAACG

Length

8 nucleotides

Bulged bases

7UG7|1|23|U|958, 7UG7|1|23|C|961

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UG7_110 not in the Motif Atlas

Homologous match to HL_5J7L_211

Geometric discrepancy: 0.0798

The information below is about HL_5J7L_211

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7UG7|1|23|PSU|955
7UG7|1|23|G|956
7UG7|1|23|C|957
7UG7|1|23|U|958
7UG7|1|23|A|959
7UG7|1|23|A|960
7UG7|1|23|C|961
7UG7|1|23|G|962

Current chains

Chain 23

23S rRNA

Nearby chains

Chain 5

5S ribosomal RNA; 5S rRNA

Chain LP

50S ribosomal protein L16