HL_7UNR_021

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_021 not in the Motif Atlas

Geometric match to HL_5D8H_002

Geometric discrepancy: 0.1395

The information below is about HL_5D8H_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UNR|1|A|G|702
7UNR|1|A|G|703
7UNR|1|A|U|704
7UNR|1|A|A|705
7UNR|1|A|A|706
7UNR|1|A|C|707
7UNR|1|A|A|708
7UNR|1|A|C|709

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain o

30S ribosomal protein S15