HL_7UNR_048
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAAC(UR3)AUAAC
- Length
- 11 nucleotides
- Bulged bases
- 7UNR|1|A|A|1900, 7UNR|1|A|C|1901
- QA status
- Modified nucleotides: UR3
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UNR_048 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1548
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7UNR|1|A|G|1897
7UNR|1|A|U|1898
7UNR|1|A|A|1899
7UNR|1|A|A|1900
7UNR|1|A|C|1901
7UNR|1|A|UR3|1902
7UNR|1|A|A|1903
7UNR|1|A|U|1904
7UNR|1|A|A|1905
7UNR|1|A|A|1906
7UNR|1|A|C|1907
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- Transfer RNA; tRNA
Coloring options: