HL_7UNR_059

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGUAUGGAAG

Length

10 nucleotides

Bulged bases

7UNR|1|A|U|2393

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_059 not in the Motif Atlas

Geometric match to HL_5J7L_192

Geometric discrepancy: 0.0877

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7UNR|1|A|U|2391
7UNR|1|A|G|2392
7UNR|1|A|U|2393
7UNR|1|A|A|2394
7UNR|1|A|U|2395
7UNR|1|A|G|2396
7UNR|1|A|G|2397
7UNR|1|A|A|2398
7UNR|1|A|A|2399
7UNR|1|A|G|2400

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain N

50S ribosomal protein L15