HL_7UNR_075

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCUGAGGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_075 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3996

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86870.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7UNR|1|a|C|179
7UNR|1|a|C|180
7UNR|1|a|U|181
7UNR|1|a|G|182
7UNR|1|a|A|183
7UNR|1|a|G|184
7UNR|1|a|G|185
7UNR|1|a|G|186

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain t

30S ribosomal protein S20