HL_7UNR_096

3D structure

PDB id

7UNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACCUCGGGU

Length

9 nucleotides

Bulged bases

7UNR|1|a|U|1130, 7UNR|1|a|C|1131

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNR_096 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2924

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87553.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

7UNR|1|a|A|1127
7UNR|1|a|C|1128
7UNR|1|a|C|1129
7UNR|1|a|U|1130
7UNR|1|a|C|1131
7UNR|1|a|G|1132
7UNR|1|a|G|1133
7UNR|1|a|G|1134
7UNR|1|a|U|1135

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9