3D structure

PDB id
7UNR (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AAUCAGAAUGU
Length
11 nucleotides
Bulged bases
7UNR|1|a|U|1358
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_7UNR_100 not in the Motif Atlas
Homologous match to HL_4LFB_030
Geometric discrepancy: 0.1103
The information below is about HL_4LFB_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_06226.4
Basepair signature
cWW-F-F-F-F-F-F-F
Number of instances in this motif group
4

Unit IDs

7UNR|1|a|A|1350
7UNR|1|a|A|1351
7UNR|1|a|U|1352
7UNR|1|a|C|1353
7UNR|1|a|A|1354
7UNR|1|a|G|1355
7UNR|1|a|A|1356
7UNR|1|a|A|1357
7UNR|1|a|U|1358
7UNR|1|a|G|1359
7UNR|1|a|U|1360

Current chains

Chain a
16S Ribosomal RNA

Nearby chains

Chain i
30S ribosomal protein S9
Chain j
30S ribosomal protein S10
Chain n
30S ribosomal protein S14

Coloring options:


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