HL_7UNR_103
3D structure
- PDB id
- 7UNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGCCUGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 7UNR|1|v|C|16, 7UNR|1|v|C|17, 7UNR|1|v|U|17|||A, 7UNR|1|v|G|18, 7UNR|1|v|G|19, 7UNR|1|v|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UNR_103 not in the Motif Atlas
- Geometric match to HL_4TUE_033
- Geometric discrepancy: 0.1591
- The information below is about HL_4TUE_033
- Detailed Annotation
- tRNA D-loop
- Broad Annotation
- No text annotation
- Motif group
- HL_93616.2
- Basepair signature
- cWW-cWS-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7UNR|1|v|C|13
7UNR|1|v|A|14
7UNR|1|v|G|15
7UNR|1|v|C|16
7UNR|1|v|C|17
7UNR|1|v|U|17|||A
7UNR|1|v|G|18
7UNR|1|v|G|19
7UNR|1|v|U|20
7UNR|1|v|A|21
7UNR|1|v|G|22
Current chains
- Chain v
- P-site initiator tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain F
- 50S ribosomal protein L5
Coloring options: