HL_7UNU_022
3D structure
- PDB id
- 7UNU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- C(1MG)UUGAAAAG
- Length
- 10 nucleotides
- Bulged bases
- 7UNU|1|A|U|736, 7UNU|1|A|U|737, 7UNU|1|A|A|741, 7UNU|1|A|A|742
- QA status
- Modified nucleotides: 1MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UNU_022 not in the Motif Atlas
- Geometric match to HL_4WF9_023
- Geometric discrepancy: 0.0987
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7UNU|1|A|C|734
7UNU|1|A|1MG|735
7UNU|1|A|U|736
7UNU|1|A|U|737
7UNU|1|A|G|738
7UNU|1|A|A|739
7UNU|1|A|A|740
7UNU|1|A|A|741
7UNU|1|A|A|742
7UNU|1|A|G|743
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain 6
- 50S ribosomal protein L34
- Chain D
- 50S ribosomal protein L3
- Chain U
- 50S ribosomal protein L22
Coloring options: