7UNU Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_7UNU_001 | 1/A/59:68 | Pseudoknot geometry | geometric HL_4GXY_003 NA | |
| HL_7UNU_002 | 1/A/87:96 | tRNA anticodon loop | geometric HL_6JXM_002 NA | |
| HL_7UNU_003 | 1/A/123:128 | No text annotation | geometric HL_5J7L_136 NA | |
| HL_7UNU_004 | 1/A/137:142 | No text annotation | geometric HL_2Y9H_003 HL_75660.6 | |
| HL_7UNU_005 | 1/A/158:168 | No text annotation | geometric HL_5J7L_138 NA | |
| HL_7UNU_006 | 1/A/194:201 | No text annotation | geometric HL_4WF9_006 HL_48677.1 | |
| HL_7UNU_007 | 1/A/225:230 | No text annotation | geometric HL_5J7L_140 NA | |
| HL_7UNU_008 | 1/A/246:252 | No text annotation | geometric HL_7RQB_008 NA | |
| HL_7UNU_009 | 1/A/299:306 | T-loop with 1 bulged base | geometric HL_7A0S_010 HL_13999.1 | |
| HL_7UNU_010 | 1/A/313:317 | No text annotation | geometric HL_5TBW_006 NA | |
| HL_7UNU_011 | 1/A/321:329 | T-loop with unstacked turn | geometric HL_5J7L_144 NA | |
| HL_7UNU_012 | 1/A/373:383 | No text annotation | geometric HL_5J7L_145 NA | |
| HL_7UNU_013 | 1/A/401:408 | Pseudoknot geometry | geometric HL_7A0S_014 HL_30680.4 | |
| HL_7UNU_014 | 1/A/453:458 | GNRA | geometric HL_4WF9_015 HL_34789.1 | |
| HL_7UNU_015 | 1/A/478:484 | GNRA | geometric HL_5J7L_148 NA | |
| HL_7UNU_016 | 1/A/535:538 | Mini UNCG | geometric HL_4V88_192 NA | |
| HL_7UNU_017 | 1/A/556:565 | T-loop with 2 stacked bulged bases | geometric HL_5J7L_150 NA | |
| HL_7UNU_018 | 1/A/601:607 | No text annotation | geometric HL_5J7L_151 NA | |
| HL_7UNU_019 | 1/A/619:624 | GNRA | geometric HL_5J7L_152 NA | |
| HL_7UNU_020 | 1/A/631:637 | No text annotation | geometric HL_7RQB_021 NA | |
| HL_7UNU_021 | 1/A/702:709 | GNRA wlth tandem sheared | geometric HL_5D8H_002 HL_98423.1 | |
| HL_7UNU_022 | 1/A/734:743 | No text annotation | geometric HL_4WF9_023 HL_50204.1 | |
| HL_7UNU_023 | 1/A/769:775 | No text annotation | geometric HL_7RQB_024 NA | |
| HL_7UNU_024 | 1/A/816:821 | No text annotation | geometric HL_7RQB_025 NA | |
| HL_7UNU_025 | 1/A/874:880 | No text annotation | geometric HL_6U8D_003 HL_32346.5 | |
| HL_7UNU_026 | 1/A/945:952 | GNRA | geometric HL_4WF9_027 HL_34789.1 | |
| HL_7UNU_027 | 1/A/968:975 | No text annotation | geometric HL_5J7L_160 NA | |
| HL_7UNU_028 | 1/A/1054:1064 | No text annotation | geometric HL_5D8H_001 HL_20174.1 | |
| HL_7UNU_029 | 1/A/1082:1089 | GNRA wlth tandem sheared | geometric HL_6PRV_002 HL_98423.1 | |
| HL_7UNU_031 | 1/A/1209:1214 | No text annotation | geometric HL_5NFV_001 HL_69752.3 | |
| HL_7UNU_032 | 1/A/1268:1276 | T-loop with 2 stacked bulged bases | geometric HL_5J7L_165 NA | |
| HL_7UNU_033 | 1/A/1311:1317 | Pseudoknot geometry with 3' bulge | geometric HL_4V9F_035 HL_49081.1 | |
| HL_7UNU_034 | 1/A/1350:1355 | GNRA | geometric HL_5J7L_167 NA | |
| HL_7UNU_035 | 1/A/1376:1385 | No text annotation | geometric HL_4V9F_037 HL_77449.1 | |
| HL_7UNU_036 | 1/A/1438:1446 | Mini UNCG with extended bulge | geometric HL_5J7L_169 NA | |
| HL_7UNU_037 | 1/A/1479:1485 | Pseudoknot geometry with 3' bulge | geometric HL_5J7L_170 NA | |
| HL_7UNU_039 | 1/A/1555:1558 | No text annotation | geometric HL_7RQB_039 NA | |
| HL_7UNU_040 | 1/A/1602:1609 | No text annotation | homologous HL_5J7L_173 NA | |
| HL_7UNU_041 | 1/A/1620:1626 | GNRA | geometric HL_5J7L_174 NA | |
| HL_7UNU_042 | 1/A/1681:1686 | UNCG | geometric HL_4JF2_003 NA | |
| HL_7UNU_043 | 1/A/1715:1718 | Mini UNCG | geometric HL_4V88_192 NA | |
| HL_7UNU_044 | 1/A/1739:1743 | No text annotation | geometric HL_7RQB_044 NA | |
| HL_7UNU_045 | 1/A/1764:1774 | No text annotation | geometric HL_4WF9_043 HL_87681.1 | |
| HL_7UNU_046 | 1/A/1793:1798 | GNRA related | geometric HL_5J7L_179 NA | |
| HL_7UNU_047 | 1/A/1855:1860 | GNRA | geometric HL_7A0S_063 HL_34789.1 | |
| HL_7UNU_048 | 1/A/1897:1907 | No text annotation | geometric HL_5TBW_049 NA | |
| HL_7UNU_049 | 1/A/1936:1944 | No text annotation | geometric HL_5J7L_182 NA | |
| HL_7UNU_050 | 1/A/2014:2023 | No text annotation | homologous HL_5J7L_183 NA | |
| HL_7UNU_052 | 1/A/2196:2202 | No text annotation | geometric HL_5J7L_185 NA | |
| HL_7UNU_053 | 1/A/2235:2243 | No text annotation | geometric HL_7A0S_052 HL_11974.1 | |
| HL_7UNU_054 | 1/A/2251:2263 | No text annotation | geometric HL_5J7L_187 NA | |
| HL_7UNU_106 | 1/A/2291:2299 | No text annotation | homologous HL_5J7L_219 NA | |
| HL_7UNU_056 | 1/A/2311:2318 | Pseudoknot geometry | geometric HL_5J7L_189 NA | |
| HL_7UNU_057 | 1/A/2342:2349 | GNRA with extra cWW | geometric HL_4WF9_053 HL_45359.1 | |
| HL_7UNU_058 | 1/A/2361:2366 | GNRA | geometric HL_5J7L_191 NA | |
| HL_7UNU_059 | 1/A/2391:2400 | No text annotation | geometric HL_5J7L_192 NA | |
| HL_7UNU_060 | 1/A/2458:2466 | No text annotation | geometric HL_5TBW_061 NA | |
| HL_7UNU_061 | 1/A/2515:2522 | GNRA variation | geometric HL_4WF9_057 HL_46665.1 | |
| HL_7UNU_062 | 1/A/2538:2544 | No text annotation | geometric HL_4WF9_058 HL_48677.1 | |
| HL_7UNU_063 | 1/A/2581:2586 | GNRA | geometric HL_3IGI_003 HL_34789.1 | |
| HL_7UNU_064 | 1/A/2645:2650 | GNRA | geometric HL_5J7L_197 NA | |
| HL_7UNU_065 | 1/A/2688:2693 | Ribsomal LSU H95 | geometric HL_5J7L_198 NA | |
| HL_7UNU_066 | 1/A/2732:2746 | No text annotation | geometric HL_4V9F_068 HL_53269.1 | |
| HL_7UNU_067 | 1/A/2783:2786 | Mini UNCG | geometric HL_4WF9_037 HL_90436.1 | |
| HL_7UNU_068 | 1/A/2806:2814 | No text annotation | geometric HL_7RQB_068 NA | |
| HL_7UNU_069 | 1/A/2843:2848 | GNRA | geometric HL_5J7L_152 NA | |
| HL_7UNU_107 | 1/B/34:48 | No text annotation | homologous HL_4V9F_074 HL_97756.3 | |
| HL_7UNU_070 | 1/B/38:44 | No text annotation | homologous HL_5J7L_203 NA | |
| HL_7UNU_071 | 1/B/86:90 | Mini UNCG | homologous HL_5J7L_204 NA | |
| HL_7UNU_072 | 1/a/12:22 | No text annotation | homologous HL_4LFB_001 HL_31940.1 | |
| HL_7UNU_074 | 1/a/152:157 | GNRA | homologous HL_4LFB_003 HL_34789.1 | |
| HL_7UNU_075 | 1/a/180:185 | UNCG variation | geometric HL_1P6V_001 NA | |
| HL_7UNU_077 | 1/a/253:261 | GNRA related | homologous HL_5J7L_006 NA | |
| HL_7UNU_078 | 1/a/290:295 | GNRA | homologous HL_5J7L_007 NA | |
| HL_7UNU_079 | 1/a/314:327 | No text annotation | homologous HL_5J7L_008 NA | |
| HL_7UNU_080 | 1/a/336:341 | UNCG | homologous HL_4LFB_009 HL_61337.1 | |
| HL_7UNU_081 | 1/a/373:378 | GNRA | homologous HL_4LFB_010 HL_34789.1 | |
| HL_7UNU_082 | 1/a/413:418 | UNCG | homologous HL_5J7L_011 NA | |
| HL_7UNU_083 | 1/a/456:464 | GNRA wlth extra near cWW | homologous HL_5J7L_012 NA | |
| HL_7UNU_109 | 1/a/516:521 | GNRA variation | homologous HL_4LFB_033 HL_34789.1 | |
| HL_7UNU_085 | 1/a/611:617 | GNRA-like with tWH | homologous HL_5J7L_014 NA | |
| HL_7UNU_086 | 1/a/683:692 | No text annotation | homologous HL_5J7L_015 NA | |
| HL_7UNU_087 | 1/a/720:725 | GNRA | homologous HL_5J7L_016 NA | |
| HL_7UNU_088 | 1/a/780:790 | No text annotation | homologous HL_5J7L_017 NA | |
| HL_7UNU_089 | 1/a/856:861 | GNRA | homologous HL_4LFB_019 HL_34789.1 | |
| HL_7UNU_090 | 1/a/891:896 | GNRA | homologous HL_4LFB_020 HL_34789.1 | |
| HL_7UNU_091 | 1/a/957:966 | No text annotation | homologous HL_4LFB_021 HL_97521.1 | |
| HL_7UNU_092 | 1/a/1006:1011 | GNRA | homologous HL_4LFB_022 HL_34789.1 | |
| HL_7UNU_094 | 1/a/1070:1075 | GNRA | homologous HL_4LFB_024 HL_34789.1 | |
| HL_7UNU_095 | 1/a/1083:1090 | T-loop related | homologous HL_4LFB_025 HL_63894.1 | |
| HL_7UNU_096 | 1/a/1128:1134 | No text annotation | homologous HL_5J7L_025 NA | |
| HL_7UNU_097 | 1/a/1159:1165 | GNRA | homologous HL_4LFB_027 HL_34789.1 | |
| HL_7UNU_098 | 1/a/1259:1264 | GNRA | homologous HL_5J7L_027 NA | |
| HL_7UNU_099 | 1/a/1308:1317 | T-loop with 3 stacked bulged bases | homologous HL_5J7L_028 NA | |
| HL_7UNU_100 | 1/a/1350:1360 | No text annotation | homologous HL_4LFB_030 HL_86432.1 | |
| HL_7UNU_101 | 1/a/1443:1448 | UNCG | homologous HL_5J7L_030 NA | |
| HL_7UNU_102 | 1/a/1509:1514 | GNRA | homologous HL_6CZR_103 NA | |
| HL_7UNU_103 | 1/v/13:22 | tRNA D-loop | geometric HL_4TUE_033 NA | |
| HL_7UNU_104 | 1/v/31:39 | tRNA anticodon loop | geometric HL_4TUE_034 NA | |
| HL_7UNU_105 | 1/v/53:61 | No text annotation | geometric HL_5NFV_001 HL_69752.3 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_7UNU_030 | No text annotation | ||
| HL_7UNU_038 | No text annotation | ||
| HL_7UNU_051 | No text annotation | ||
| HL_7UNU_055 | No text annotation | ||
| HL_7UNU_073 | No text annotation | ||
| HL_7UNU_108 | No text annotation | ||
| HL_7UNU_076 | No text annotation | ||
| HL_7UNU_084 | No text annotation | ||
| HL_7UNU_093 | UNCG |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_7UNU_001 | 1/A/24:30, 1/A/501:507 | Triple sheared with non-canonical cWW | geometric IL_5J7L_245 NA | |
| IL_7UNU_002 | 1/A/36:37, 1/A/433:435 | Single bulged A | geometric IL_7RQB_002 NA | |
| IL_7UNU_003 | 1/A/43:44, 1/A/425:427 | Minor groove platform | geometric IL_7A0S_003 IL_34520.1 | |
| IL_7UNU_004 | 1/A/81:85, 1/A/98:105 | Kink-turn | geometric IL_6UFG_001 NA | |
| IL_7UNU_005 | 1/A/183:184, 1/A/212:214 | Single stack bend | geometric IL_7A0S_005 IL_15011.1 | |
| IL_7UNU_006 | 1/A/188:194, 1/A/201:208 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_7A0S_006 IL_62167.1 | |
| IL_7UNU_007 | 1/A/239:245, 1/A/253:258 | 7x6 Sarcin-Ricin; G-bulge | geometric IL_5J7L_251 NA | |
| IL_7UNU_008 | 1/A/269:274, 1/A/354:361 | No text annotation | ||
| IL_7UNU_009 | 1/A/279:282, 1/A/346:349 | Tandem non-canonical cWW pairs | geometric IL_5C5W_003 NA | |
| IL_7UNU_010 | 1/A/287:289, 1/A/337:341 | No text annotation | geometric IL_4WF9_014 IL_76658.1 | |
| IL_7UNU_011 | 1/A/297:299, 1/A/306:308 | Isolated non-canonical cWW pair | geometric IL_3BNT_001 IL_71625.1 | |
| IL_7UNU_012 | 1/A/472:475, 1/A/487:500 | No text annotation | geometric IL_5J7L_255 NA | |
| IL_7UNU_013 | 1/A/527:530, 1/A/544:547 | Double sheared | geometric IL_5J7L_256 NA | |
| IL_7UNU_014 | 1/A/534:535, 1/A/538:540 | Single bulged U | geometric IL_6MWN_006 IL_97561.1 | |
| IL_7UNU_015 | 1/A/554:556, 1/A/565:567 | Isolated non-canonical cWW pair | geometric IL_5J7L_257 NA | |
| IL_7UNU_016 | 1/A/596:600, 1/A/608:612 | AAA cross-strand stack | geometric IL_5J7L_258 NA | |
| IL_7UNU_017 | 1/A/662:664, 1/A/796:798 | Isolated non-canonical cWW pair | geometric IL_5J7L_259 NA | |
| IL_7UNU_018 | 1/A/664:668, 1/A/789:796 | tHW-tHW cross-strand stack | geometric IL_5J7L_260 NA | |
| IL_7UNU_019 | 1/A/687:688, 1/A/753:755 | Single bulged A | geometric IL_4V9F_025 IL_14190.1 | |
| IL_7UNU_020 | 1/A/692:693, 1/A/718:720 | Single bulged G | geometric IL_7RQB_020 NA | |
| IL_7UNU_021 | 1/A/693:697, 1/A/714:718 | Triple sheared | geometric IL_5J7L_263 NA | |
| IL_7UNU_022 | 1/A/728:730, 1/A/747:748 | Major groove platform | geometric IL_5J7L_264 NA | |
| IL_7UNU_023 | 1/A/731:733, 1/A/744:746 | Isolated non-canonical cWW pair | geometric IL_7A0S_020 IL_01003.1 | |
| IL_7UNU_024 | 1/A/765:767, 1/A/777:781 | Multiple bulged bases | geometric IL_7RQB_023 NA | |
| IL_7UNU_025 | 1/A/834:837, 1/A/919:924 | No text annotation | ||
| IL_7UNU_026 | 1/A/839:840, 1/A/915:917 | Single stack bend | geometric IL_5J7L_269 NA | |
| IL_7UNU_027 | 1/A/845:851, 1/A/904:910 | 7x7 Sarcin-Ricin with intercalated A; G-bulge | geometric IL_5J7L_270 NA | |
| IL_7UNU_028 | 1/A/851:852, 1/A/902:904 | Minor groove platform | geometric IL_4V9F_034 IL_34520.1 | |
| IL_7UNU_029 | 1/A/853:857, 1/A/898:901 | C-loop | geometric IL_4WF9_033 IL_16301.1 | |
| IL_7UNU_030 | 1/A/859:861, 1/A/894:896 | Isolated cWS basepair | geometric IL_5TBW_047 NA | |
| IL_7UNU_031 | 1/A/864:868, 1/A/887:891 | Double sheared with non-canonical cWW | geometric IL_4WFL_001 IL_87767.1 | |
| IL_7UNU_033 | 1/A/984:986, 1/A/1150:1151 | Single bulged C | geometric IL_7RQB_035 NA | |
| IL_7UNU_034 | 1/A/988:992, 1/A/1144:1148 | UAA/GAN | geometric IL_5J7L_277 NA | |
| IL_7UNU_035 | 1/A/994:1001, 1/A/1141:1142 | SSU/LSU pseudoknot | geometric IL_5J7L_278 NA | |
| IL_7UNU_036 | 1/A/1001:1003, 1/A/1140:1141 | Single bulged U | geometric IL_5J7L_279 NA | |
| IL_7UNU_037 | 1/A/1008:1014, 1/A/1130:1135 | Kink-turn related | geometric IL_5J7L_280 NA | |
| IL_7UNU_038 | 1/A/1014:1020, 1/A/1114:1130 | No text annotation | geometric IL_4WF9_040 IL_50715.4 | |
| IL_7UNU_039 | 1/A/1021:1024, 1/A/1111:1113 | Isolated non-canonical cWW pair | geometric IL_5J7L_282 NA | |
| IL_7UNU_040 | 1/A/1028:1031, 1/A/1104:1107 | Tandem non-canonical cWW pairs | geometric IL_5J7L_283 NA | |
| IL_7UNU_041 | 1/A/1033:1041, 1/A/1098:1102 | Kink-turn | geometric IL_5J7L_284 NA | |
| IL_7UNU_042 | 1/A/1049:1052, 1/A/1066:1069 | No text annotation | geometric IL_5D8H_002 IL_28482.1 | |
| IL_7UNU_043 | 1/A/1077:1080, 1/A/1091:1092 | Major groove platform | geometric IL_3OXE_003 IL_48076.7 | |
| IL_7UNU_044 | 1/A/1183:1185, 1/A/1234:1237 | Isolated cWS basepair | geometric IL_4WF9_044 IL_42997.4 | |
| IL_7UNU_045 | 1/A/1189:1193, 1/A/1227:1230 | No text annotation | geometric IL_5J7L_287 NA | |
| IL_7UNU_046 | 1/A/1195:1202, 1/A/1221:1225 | Kink-turn | geometric IL_5J7L_288 NA | |
| IL_7UNU_047 | 1/A/1249:1256, 1/A/1998:2004 | 8x7 Sarcin-Ricin; G-bulge | geometric IL_5J7L_289 NA | |
| IL_7UNU_048 | 1/A/1297:1300, 1/A/1593:1594 | Major groove platform; stack outside cWW | geometric IL_5J7L_290 NA | |
| IL_7UNU_049 | 1/A/1306:1310, 1/A/1318:1320 | C-loop | geometric IL_7RQB_051 NA | |
| IL_7UNU_050 | 1/A/1338:1342, 1/A/1363:1367 | UAA/GAN | geometric IL_5J7L_292 NA | |
| IL_7UNU_051 | 1/A/1344:1348, 1/A/1357:1361 | tSH-tHW-tHS | geometric IL_5J7L_293 NA | |
| IL_7UNU_052 | 1/A/1402:1403, 1/A/1572:1577 | 180 degree turn | homologous IL_8VTW_053 NA | |
| IL_7UNU_053 | 1/A/1404:1408, 1/A/1567:1571 | UAA/GAN | geometric IL_5J7L_295 NA | |
| IL_7UNU_054 | 1/A/1419:1422, 1/A/1547:1551 | Tandem non-canonical cWW pairs | geometric IL_5J7L_296 NA | |
| IL_7UNU_055 | 1/A/1424:1427, 1/A/1541:1545 | tSH-tHW | geometric IL_7RQB_057 NA | |
| IL_7UNU_056 | 1/A/1437:1438, 1/A/1446:1448 | Single bulged U | geometric IL_5J7L_298 NA | |
| IL_7UNU_057 | 1/A/1455:1458, 1/A/1507:1511 | No text annotation | geometric IL_5J7L_299 NA | |
| IL_7UNU_058 | 1/A/1460:1465, 1/A/1500:1505 | No text annotation | ||
| IL_7UNU_059 | 1/A/1468:1469, 1/A/1494:1497 | 180 degree turn | geometric IL_5J7L_301 NA | |
| IL_7UNU_060 | 1/A/1476:1478, 1/A/1486:1487 | Single bulged A | geometric IL_5J7L_302 NA | |
| IL_7UNU_061 | 1/A/1513:1516, 1/A/1532:1536 | UAA/GAN variation | geometric IL_5J7L_303 NA | |
| IL_7UNU_062 | 1/A/1641:1646, 1/A/1991:1993 | No text annotation | geometric IL_5J7L_304 NA | |
| IL_7UNU_063 | 1/A/1653:1655, 1/A/1982:1984 | Isolated tWW turn | geometric IL_5J7L_305 NA | |
| IL_7UNU_064 | 1/A/1656:1659, 1/A/1980:1981 | Major groove platform; stack outside cWW | geometric IL_5J7L_306 NA | |
| IL_7UNU_181 | 1/A/1656:1664, 1/A/1977:1981 | No text annotation | homologous IL_4WF9_117 IL_80252.1 | |
| IL_7UNU_065 | 1/A/1659:1664, 1/A/1977:1980 | Intercalated tWH | geometric IL_4WF9_065 IL_28217.1 | |
| IL_7UNU_066 | 1/A/1676:1681, 1/A/1686:1692 | tSH-tSH-tHH-tHS | geometric IL_5J7L_308 NA | |
| IL_7UNU_067 | 1/A/1708:1712, 1/A/1722:1727 | Triple sheared related | geometric IL_5J7L_063 NA | |
| IL_7UNU_068 | 1/A/1714:1715, 1/A/1718:1720 | No text annotation | ||
| IL_7UNU_069 | 1/A/1757:1758, 1/A/1967:1969 | Single bulged A | geometric IL_5J7L_312 NA | |
| IL_7UNU_070 | 1/A/1785:1791, 1/A/1800:1808 | Kink-turn related | geometric IL_5J7L_313 NA | |
| IL_7UNU_071 | 1/A/1824:1827, 1/A/1889:1890 | Minor groove platform, major groove intercalation | geometric IL_5J7L_314 NA | |
| IL_7UNU_072 | 1/A/1828:1829, 1/A/1885:1888 | Major groove intercalation | geometric IL_4V9F_067 IL_71421.1 | |
| IL_7UNU_073 | 1/A/1833:1836, 1/A/1880:1881 | Major groove minor groove platform; mini C-loop | geometric IL_5J7L_316 NA | |
| IL_7UNU_182 | 1/A/1838:1847, 1/A/1869:1878 | No text annotation | homologous IL_5J7L_387 NA | |
| IL_7UNU_074 | 1/A/1851:1854, 1/A/1861:1865 | UAA/GAN related | geometric IL_5J7L_317 NA | |
| IL_7UNU_075 | 1/A/1920:1921, 1/A/1951:1954 | Bulged stacked bases | geometric IL_7RQB_076 NA | |
| IL_7UNU_076 | 1/A/1921:1932, 1/A/1948:1951 | No text annotation | geometric IL_7A0S_072 IL_04332.3 | |
| IL_7UNU_077 | 1/A/2037:2039, 1/A/2604:2605 | Major groove platform | geometric IL_7RQB_078 NA | |
| IL_7UNU_078 | 1/A/2041:2043, 1/A/2599:2602 | No text annotation | geometric IL_5J7L_321 NA | |
| IL_7UNU_183 | 1/A/2054:2056, 1/A/2429:2430 | Single bulged U | homologous IL_4WF9_080 IL_97561.1 | |
| IL_7UNU_081 | 1/A/2057:2058, 1/A/2425:2428 | Minor groove platform | geometric IL_5TBW_094 NA | |
| IL_7UNU_082 | 1/A/2068:2070, 1/A/2223:2226 | Isolated tHS basepair with bulges | geometric IL_5J7L_325 NA | |
| IL_7UNU_083 | 1/A/2072:2074, 1/A/2219:2221 | Isolated non-canonical cWW pair | geometric IL_5J7L_326 NA | |
| IL_7UNU_087 | 1/A/2189:2191, 1/A/2207:2208 | Single bulged U | geometric IL_4O26_001 IL_97561.1 | |
| IL_7UNU_088 | 1/A/2284:2286, 1/A/2304:2308 | No text annotation | geometric IL_5J7L_332 NA | |
| IL_7UNU_089 | 1/A/2337:2340, 1/A/2351:2354 | Double sheared | geometric IL_5J7L_333 NA | |
| IL_7UNU_090 | 1/A/2388:2390, 1/A/2401:2402 | Single bulged U | geometric IL_5J7L_334 NA | |
| IL_7UNU_186 | 1/A/2440:2441, 1/A/2485:2487 | Single stack bend | homologous IL_5J7L_391 NA | |
| IL_7UNU_187 | 1/A/2441:2442, 1/A/2483:2485 | Major groove platform | homologous IL_5J7L_392 NA | |
| IL_7UNU_092 | 1/A/2444:2446, 1/A/2480:2481 | Major groove platform | geometric IL_7A0S_085 IL_48076.7 | |
| IL_7UNU_093 | 1/A/2446:2448, 1/A/2476:2480 | Major groove minor groove platform with extra cWW | geometric IL_5J7L_337 NA | |
| IL_7UNU_094 | 1/A/2453:2457, 1/A/2467:2471 | Double sheared with non-canonical cWW | geometric IL_5J7L_338 NA | |
| IL_7UNU_095 | 1/A/2494:2495, 1/A/2567:2569 | Major groove platform | geometric IL_7A0S_088 IL_46637.1 | |
| IL_7UNU_096 | 1/A/2497:2499, 1/A/2561:2565 | Isolated non-canonical cWW with bulges | geometric IL_5J7L_340 NA | |
| IL_7UNU_097 | 1/A/2499:2500, 1/A/2558:2561 | No text annotation | geometric IL_5J7L_341 NA | |
| IL_7UNU_098 | 1/A/2509:2510, 1/A/2527:2530 | Major groove platform with intercalation | geometric IL_5J7L_342 NA | |
| IL_7UNU_099 | 1/A/2578:2579, 1/A/2588:2590 | Single bulged A | geometric IL_1U9S_001 NA | |
| IL_7UNU_100 | 1/A/2623:2627, 1/A/2761:2769 | tSH-tHS-tHW | geometric IL_7RQB_102 NA | |
| IL_7UNU_101 | 1/A/2639:2645, 1/A/2650:2655 | Sarcin-Ricin target in LSU H95; G-bulge | geometric IL_7A0S_094 IL_16458.5 | |
| IL_7UNU_102 | 1/A/2667:2671, 1/A/2712:2714 | C-loop | geometric IL_7RQB_104 NA | |
| IL_7UNU_103 | 1/A/2674:2678, 1/A/2705:2709 | UAA/GAN related, with intercalation | geometric IL_5J7L_348 NA | |
| IL_7UNU_104 | 1/A/2682:2683, 1/A/2698:2701 | Multiple bulged bases | geometric IL_5J7L_349 NA | |
| IL_7UNU_105 | 1/A/2724:2729, 1/A/2749:2754 | UAA/GAN with extra cWW | geometric IL_5J7L_350 NA | |
| IL_7UNU_106 | 1/A/2782:2783, 1/A/2786:2788 | Single bulged A | geometric IL_7RQB_019 NA | |
| IL_7UNU_107 | 1/A/2793:2798, 1/A/2876:2879 | No text annotation | geometric IL_5J7L_351 NA | |
| IL_7UNU_108 | 1/A/2825:2826, 1/A/2865:2867 | Major groove intercalation | geometric IL_5J7L_352 NA | |
| IL_7UNU_109 | 1/A/2830:2833, 1/A/2857:2861 | Multiple bulged bases with non-canonical cWW | geometric IL_5J7L_353 NA | |
| IL_7UNU_110 | 1/A/2834:2839, 1/A/2852:2856 | tHS double platform | geometric IL_5J7L_354 NA | |
| IL_7UNU_111 | 1/B/17:18, 1/B/65:67 | Major groove intercalation | homologous IL_4WF9_112 IL_14190.1 | |
| IL_7UNU_112 | 1/B/23:28, 1/B/56:60 | No text annotation | homologous IL_5J7L_356 NA | |
| IL_7UNU_113 | 1/B/30:31, 1/B/51:54 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_357 NA | |
| IL_7UNU_114 | 1/B/34:38, 1/B/44:48 | Symmetric double minor groove platform | geometric IL_7RQB_114 NA | |
| IL_7UNU_115 | 1/B/71:79, 1/B/97:105 | Bacterial 5S Loop E | homologous IL_7RQB_115 NA | |
| IL_7UNU_116 | 1/a/30:32, 1/a/546:547 | Single bulged G | homologous IL_5J7L_001 NA | |
| IL_7UNU_117 | 1/a/44:45, 1/a/390:392 | Single bulged A | homologous IL_5J7L_002 NA | |
| IL_7UNU_118 | 1/a/47:52, 1/a/353:355 | No text annotation | geometric IL_5J7L_003 NA | |
| IL_7UNU_119 | 1/a/54:56, 1/a/350:351 | Minor groove platform | homologous IL_4LFB_004 IL_34520.1 | |
| IL_7UNU_120 | 1/a/63:66, 1/a/97:98 | Multiple bulged bases | homologous IL_5J7L_005 NA | |
| IL_7UNU_121 | 1/a/67:69, 1/a/94:96 | Isolated non-canonical cWW pair | geometric IL_6CZR_171 NA | |
| IL_7UNU_122 | 1/a/70:75, 1/a/88:93 | No text annotation | geometric IL_5TBW_026 NA | |
| IL_7UNU_123 | 1/a/122:125, 1/a/225:227 | Isolated non-canonical cWW pair | homologous IL_5J7L_009 NA | |
| IL_7UNU_124 | 1/a/126:130, 1/a/221:224 | No text annotation | homologous IL_4LFB_008 IL_60988.1 | |
| IL_7UNU_125 | 1/a/138:140, 1/a/170:172 | Isolated cWH basepair | homologous IL_5J7L_011 NA | |
| IL_7UNU_126 | 1/a/141:147, 1/a/162:169 | tWH-tWH-tHW-tHW | homologous IL_5J7L_012 NA | |
| IL_7UNU_127 | 1/a/197:200, 1/a/207:208 | Minor groove platform | geometric IL_3IWN_005 IL_87975.1 | |
| IL_7UNU_128 | 1/a/236:241, 1/a/271:278 | Kink-turn with non-sequential stacking | homologous IL_4LFB_011 IL_46174.4 | |
| IL_7UNU_129 | 1/a/243:246, 1/a/268:269 | No text annotation | homologous IL_4LFB_012 IL_22002.1 | |
| IL_7UNU_130 | 1/a/286:287, 1/a/298:302 | C-loop | homologous IL_4LFB_013 IL_06671.1 | |
| IL_7UNU_131 | 1/a/361:363, 1/a/386:387 | Single bulged U | geometric IL_5J7L_017 NA | |
| IL_7UNU_132 | 1/a/365:369, 1/a/383:384 | C-loop | homologous IL_5J7L_018 NA | |
| IL_7UNU_133 | 1/a/369:370, 1/a/381:383 | Single bulged G | geometric IL_5J7L_019 NA | |
| IL_7UNU_134 | 1/a/403:410, 1/a/421:427 | No text annotation | homologous IL_4LFB_017 IL_62329.1 | |
| IL_7UNU_135 | 1/a/434:436, 1/a/486:491 | No text annotation | homologous IL_5J7L_021 NA | |
| IL_7UNU_136 | 1/a/440:444, 1/a/477:482 | tSH-tHW-tWW | homologous IL_5J7L_022 NA | |
| IL_7UNU_137 | 1/a/444:447, 1/a/473:477 | No text annotation | ||
| IL_7UNU_138 | 1/a/498:505, 1/a/534:535 | SSU/LSU pseudoknot | homologous IL_4LFB_020 IL_11411.1 | |
| IL_7UNU_139 | 1/a/509:515, 1/a/522:530 | Kink-turn related | geometric IL_4V88_415 NA | |
| IL_7UNU_140 | 1/a/563:569, 1/a/874:875 | No text annotation | homologous IL_5J7L_026 NA | |
| IL_7UNU_141 | 1/a/574:578, 1/a/751:755 | tSH-tHW-tHS | homologous IL_6CZR_135 NA | |
| IL_7UNU_142 | 1/a/587:590, 1/a/638:640 | Major groove platform with extra pair | geometric IL_5TBW_091 NA | |
| IL_7UNU_143 | 1/a/591:592, 1/a/634:637 | Major groove minor groove platform; mini C-loop | homologous IL_5J7L_029 NA | |
| IL_7UNU_144 | 1/a/599:606, 1/a/622:627 | No text annotation | homologous IL_5J7L_030 NA | |
| IL_7UNU_145 | 1/a/648:649, 1/a/745:748 | Major groove platform; stack outside cWW | homologous IL_4LFB_027 IL_74641.1 | |
| IL_7UNU_146 | 1/a/652:653, 1/a/740:742 | Single stack bend | homologous IL_5J7L_032 NA | |
| IL_7UNU_147 | 1/a/656:660, 1/a/734:737 | Tandem non-canonical cWW pairs | homologous IL_5J7L_033 NA | |
| IL_7UNU_188 | 1/a/667:671, 1/a/707:711 | Triple non-canonical cWW pairs | homologous IL_5J7L_361 NA | |
| IL_7UNU_149 | 1/a/678:682, 1/a/693:700 | Kink-turn | homologous IL_5J7L_035 NA | |
| IL_7UNU_150 | 1/a/768:772, 1/a/798:799 | Left turn | homologous IL_4LFB_032 IL_29346.3 | |
| IL_7UNU_151 | 1/a/773:777, 1/a/793:797 | tSH-tHW-tHS | homologous IL_5J7L_037 NA | |
| IL_7UNU_152 | 1/a/881:888, 1/a/899:904 | 8x6 Sarcin-Ricin with inserted Y; G-bulge | homologous IL_5J7L_038 NA | |
| IL_7UNU_153 | 1/a/916:917, 1/a/1387:1389 | Single bulged A | homologous IL_5J7L_039 NA | |
| IL_7UNU_154 | 1/a/919:921, 1/a/1384:1385 | Single bulged G | homologous IL_5J7L_040 NA | |
| IL_7UNU_155 | 1/a/927:929, 1/a/1374:1378 | Minor groove platform | homologous IL_5J7L_041 NA | |
| IL_7UNU_156 | 1/a/947:948, 1/a/1220:1222 | No text annotation | homologous IL_6CZR_150 NA | |
| IL_7UNU_157 | 1/a/987:991, 1/a/1038:1039 | Minor groove platform | geometric IL_4LFB_039 IL_61370.1 | |
| IL_7UNU_158 | 1/a/992:993, 1/a/1035:1037 | Single stack bend | homologous IL_5J7L_044 NA | |
| IL_7UNU_159 | 1/a/1000:1004, 1/a/1013:1017 | No text annotation | ||
| IL_7UNU_160 | 1/a/1042:1044, 1/a/1202:1203 | Single bulged U | geometric IL_5J7L_046 NA | |
| IL_7UNU_189 | 1/a/1046:1050, 1/a/1198:1200 | Isolated cWS basepair | homologous IL_4LFB_044 IL_82453.1 | |
| IL_7UNU_162 | 1/a/1051:1052, 1/a/1193:1197 | Minor groove platform | homologous IL_5J7L_048 NA | |
| IL_7UNU_163 | 1/a/1054:1055, 1/a/1189:1191 | Single bulged A | geometric IL_5J7L_049 NA | |
| IL_7UNU_164 | 1/a/1055:1057, 1/a/1187:1189 | Isolated non-canonical cWW pair | geometric IL_5J7L_050 NA | |
| IL_7UNU_165 | 1/a/1118:1122, 1/a/1138:1143 | No text annotation | homologous IL_5J7L_051 NA | |
| IL_7UNU_166 | 1/a/1123:1126, 1/a/1136:1137 | Minor groove platform | homologous IL_5J7L_052 NA | |
| IL_7UNU_167 | 1/a/1152:1155, 1/a/1169:1175 | No text annotation | geometric IL_5J7L_053 NA | |
| IL_7UNU_168 | 1/a/1240:1247, 1/a/1278:1285 | No text annotation | ||
| IL_7UNU_169 | 1/a/1249:1252, 1/a/1271:1276 | 180 degree turn | homologous IL_4LFB_052 IL_08849.1 | |
| IL_7UNU_170 | 1/a/1253:1257, 1/a/1266:1270 | Double sheared with non-canonical cWW | homologous IL_5J7L_056 NA | |
| IL_7UNU_171 | 1/a/1297:1302, 1/a/1323:1328 | No text annotation | geometric IL_4LFB_055 IL_57885.1 | |
| IL_7UNU_172 | 1/a/1393:1395, 1/a/1495:1498 | No text annotation | homologous IL_5J7L_058 NA | |
| IL_7UNU_173 | 1/a/1395:1398, 1/a/1491:1495 | No text annotation | geometric IL_4V88_464 NA | |
| IL_7UNU_174 | 1/a/1399:1401, 1/a/1488:1490 | Isolated non-canonical cWW pair | geometric IL_5MWI_007 NA | |
| IL_7UNU_175 | 1/a/1401:1403, 1/a/1485:1488 | Isolated non-canonical cWW pair | geometric IL_5J7L_009 NA | |
| IL_7UNU_176 | 1/a/1406:1408, 1/a/1480:1482 | Isolated non-canonical cWW pair | homologous IL_5J7L_061 NA | |
| IL_7UNU_177 | 1/a/1410:1413, 1/a/1475:1478 | Double sheared | homologous IL_5J7L_062 NA | |
| IL_7UNU_178 | 1/a/1424:1429, 1/a/1460:1464 | Triple sheared related | homologous IL_5J7L_063 NA | |
| IL_7UNU_179 | 1/a/1434:1436, 1/a/1454:1455 | Single bulged A | homologous IL_5J7L_064 NA | |
| IL_7UNU_180 | 1/a/1439:1442, 1/a/1449:1451 | No text annotation | homologous IL_5J7L_065 NA |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_7UNU_032 | No text annotation | ||
| IL_7UNU_079 | Not an internal loop | ||
| IL_7UNU_080 | Isolated non-canonical cWW pair | ||
| IL_7UNU_084 | No text annotation | ||
| IL_7UNU_184 | No text annotation | ||
| IL_7UNU_085 | No text annotation | ||
| IL_7UNU_185 | No text annotation | ||
| IL_7UNU_086 | No text annotation | ||
| IL_7UNU_091 | No text annotation | ||
| IL_7UNU_148 | No text annotation | ||
| IL_7UNU_161 | No text annotation |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J3_7UNU_001 | 1/A/30:31, 1/A/465:472, 1/A/500:501 | No text annotation | geometric J3_5J7L_036 NA | |
| J3_7UNU_026 | 1/A/30:31, 1/A/465:475, 1/A/487:501 | No text annotation | homologous J3_4WF9_011 J3_17917.1 | |
| J3_7UNU_027 | 1/A/32:35, 1/A/436:452, 1/A/459:464 | No text annotation | homologous J3_9DFE_003 J3_07616.1 | |
| J3_7UNU_002 | 1/A/56:57, 1/A/70:76, 1/A/110:114 | No text annotation | homologous J3_5J7L_037 NA | |
| J3_7UNU_028 | 1/A/291:295, 1/A/310:319, 1/A/331:335 | No text annotation | homologous J3_4WF9_015 J3_77124.1 | |
| J3_7UNU_003 | 1/A/673:679, 1/A/763:765, 1/A/781:784 | No text annotation | homologous J3_8VTW_001 NA | |
| J3_7UNU_004 | 1/A/688:690, 1/A/722:726, 1/A/750:753 | No text annotation | homologous J3_8VTW_002 NA | |
| J3_7UNU_005 | 1/A/1045:1047, 1/A/1071:1077, 1/A/1092:1094 | No text annotation | homologous J3_8VTW_003 NA | |
| J3_7UNU_006 | 1/A/1285:1290, 1/A/1615:1617, 1/A/1629:1632 | No text annotation | homologous J3_8VTW_004 NA | |
| J3_7UNU_007 | 1/A/1293:1296, 1/A/1595:1601, 1/A/1610:1612 | No text annotation | homologous J3_8VTW_005 NA | |
| J3_7UNU_029 | 1/A/1331:1337, 1/A/1368:1372, 1/A/1389:1390 | No text annotation | homologous J3_7A0S_018 J3_94309.1 | |
| J3_7UNU_030 | 1/A/1411:1416, 1/A/1554:1555, 1/A/1558:1564 | No text annotation | homologous J3_5J7L_069 NA | |
| J3_7UNU_008 | 1/A/2078:2080, 1/A/2183:2187, 1/A/2210:2215 | No text annotation | homologous J3_8VTW_006 NA | |
| J3_7UNU_031 | 1/A/2269:2271, 1/A/2371:2382, 1/A/2408:2414 | No text annotation | homologous J3_5J7L_070 NA | |
| J3_7UNU_009 | 1/A/2282:2284, 1/A/2308:2310, 1/A/2319:2324 | No text annotation | homologous J3_8VTW_007 NA | |
| J3_7UNU_032 | 1/A/2282:2286, 1/A/2304:2310, 1/A/2319:2324 | No text annotation | homologous J3_5J7L_071 NA | |
| J3_7UNU_010 | 1/A/2504:2507, 1/A/2532:2534, 1/A/2548:2554 | No text annotation | homologous J3_8VTW_008 NA | |
| J3_7UNU_011 | 1/A/2776:2778, 1/A/2792:2793, 1/A/2879:2881 | No text annotation | homologous J3_5J7L_047 NA | |
| J3_7UNU_012 | 1/A/2801:2802, 1/A/2818:2823, 1/A/2869:2873 | No text annotation | homologous J3_4WF9_021 J3_76911.2 | |
| J3_7UNU_040 | 1/B/10:16, 1/B/68:69, 1/B/107:110 | No text annotation | homologous J3_7A0S_021 J3_47324.1 | |
| J3_7UNU_014 | 1/a/46:47, 1/a/355:361, 1/a/387:389 | No text annotation | homologous J3_5J7L_001 NA | |
| J3_7UNU_034 | 1/a/46:52, 1/a/353:361, 1/a/387:389 | No text annotation | homologous J3_5J7L_050 NA | |
| J3_7UNU_015 | 1/a/580:582, 1/a/645:648, 1/a/748:749 | No text annotation | geometric J3_4LFB_011 J3_01633.1 | |
| J3_7UNU_035 | 1/a/580:582, 1/a/645:649, 1/a/745:749 | No text annotation | homologous J3_4LFB_015 J3_17385.5 | |
| J3_7UNU_016 | 1/a/666:667, 1/a/711:719, 1/a/726:728 | No text annotation | homologous J3_5J7L_003 NA | |
| J3_7UNU_017 | 1/a/820:823, 1/a/851:855, 1/a/862:868 | No text annotation | homologous J3_5J7L_004 NA | |
| J3_7UNU_036 | 1/a/930:933, 1/a/1338:1344, 1/a/1366:1373 | No text annotation | homologous J3_5J7L_052 NA | |
| J3_7UNU_018 | 1/a/937:940, 1/a/1229:1231, 1/a/1331:1334 | No text annotation | homologous J3_4LFB_003 J3_44359.1 | |
| J3_7UNU_019 | 1/a/949:956, 1/a/967:978, 1/a/1215:1219 | No text annotation | homologous J3_5J7L_006 NA | |
| J3_7UNU_020 | 1/a/984:987, 1/a/1039:1041, 1/a/1204:1209 | No text annotation | homologous J3_4LFB_005 J3_84394.1 | |
| J3_7UNU_037 | 1/a/984:991, 1/a/1038:1041, 1/a/1204:1209 | No text annotation | homologous J3_4LFB_016 J3_28881.1 | |
| J3_7UNU_022 | 1/a/1057:1062, 1/a/1101:1107, 1/a/1181:1187 | No text annotation | homologous J3_5J7L_008 NA | |
| J3_7UNU_038 | 1/a/1067:1068, 1/a/1077:1080, 1/a/1093:1096 | No text annotation | homologous J3_4LFB_017 J3_11018.1 | |
| J3_7UNU_024 | 1/a/1110:1112, 1/a/1149:1152, 1/a/1175:1178 | No text annotation | homologous J3_5J7L_010 NA | |
| J3_7UNU_039 | 1/a/1110:1112, 1/a/1149:1155, 1/a/1169:1178 | No text annotation | homologous J3_5J7L_054 NA | |
| J3_7UNU_025 | 1/a/1231:1235, 1/a/1290:1297, 1/a/1328:1331 | No text annotation | homologous J3_4LFB_009 J3_03192.1 | |
| J4_7UNU_001 | 1/A/268:269, 1/A/361:366, 1/A/390:397, 1/A/412:415 | No text annotation | homologous J4_5J7L_018 NA | |
| J4_7UNU_002 | 1/A/291:295, 1/A/310:313, 1/A/317:319, 1/A/331:335 | No text annotation | homologous J4_7A0S_002 J4_16174.1 | |
| J4_7UNU_003 | 1/A/591:594, 1/A/614:618, 1/A/625:628, 1/A/640:646 | No text annotation | homologous J4_5J7L_020 NA | |
| J4_7UNU_004 | 1/A/1257:1263, 1/A/1281:1282, 1/A/1635:1638, 1/A/1996:1997 | No text annotation | homologous J4_5J7L_021 NA | |
| J4_7UNU_005 | 1/A/1297:1301, 1/A/1325:1330, 1/A/1391:1392, 1/A/1587:1594 | No text annotation | homologous J4_5J7L_022 NA | |
| J4_7UNU_006 | 1/A/1300:1301, 1/A/1325:1330, 1/A/1391:1392, 1/A/1587:1593 | No text annotation | homologous J4_5J7L_023 NA | |
| J4_7UNU_007 | 1/A/1431:1432, 1/A/1453:1454, 1/A/1512:1513, 1/A/1536:1537 | No text annotation | homologous J4_5J7L_024 NA | |
| J4_7UNU_008 | 1/A/1759:1763, 1/A/1775:1779, 1/A/1814:1817, 1/A/1962:1966 | No text annotation | homologous J4_5J7L_025 NA | |
| J4_7UNU_009 | 1/A/1820:1822, 1/A/1892:1893, 1/A/1911:1920, 1/A/1954:1959 | No text annotation | homologous J4_9DFE_008 J4_42306.1 | |
| J4_7UNU_010 | 1/A/2272:2276, 1/A/2330:2334, 1/A/2357:2359, 1/A/2368:2370 | No text annotation | homologous J4_5J7L_027 NA | |
| J4_7UNU_011 | 1/A/2630:2633, 1/A/2661:2663, 1/A/2718:2722, 1/A/2756:2758 | No text annotation | homologous J4_5J7L_028 NA | |
| J4_7UNU_012 | 1/a/109:116, 1/a/233:234, 1/a/280:283, 1/a/305:306 | No text annotation | homologous J4_5J7L_001 NA | |
| J4_7UNU_016 | 1/a/137:138, 1/a/172:178, 1/a/187:192, 1/a/213:214 | No text annotation | ||
| J4_7UNU_014 | 1/a/569:571, 1/a/758:763, 1/a/804:815, 1/a/873:874 | No text annotation | homologous J4_5J7L_003 NA | |
| J4_7UNU_015 | 1/v/7:10, 1/v/25:27, 1/v/43:49, 1/v/65:66 | tRNA junction | homologous J4_9DFC_015 NA | |
| J5_7UNU_001 | 1/A/47:54, 1/A/116:121, 1/A/130:131, 1/A/148:150, 1/A/176:178 | No text annotation | homologous J5_5J7L_013 NA | |
| J5_7UNU_002 | 1/A/522:524, 1/A/550:554, 1/A/567:569, 1/A/1248:1249, 1/A/2004:2005 | No text annotation | homologous J5_5J7L_014 NA | |
| J5_7UNU_003 | 1/A/574:579, 1/A/658:661, 1/A/799:802, 1/A/1182:1183, 1/A/1237:1243 | No text annotation | homologous J5_5J7L_015 NA | |
| J5_7UNU_004 | 1/A/1664:1672, 1/A/1696:1697, 1/A/1738:1739, 1/A/1743:1751, 1/A/1975:1977 | No text annotation | homologous J5_5J7L_016 NA | |
| J5_7UNU_005 | 1/A/2044:2051, 1/A/2433:2440, 1/A/2487:2494, 1/A/2569:2575, 1/A/2593:2598 | No text annotation | ||
| J5_7UNU_006 | 1/A/2061:2064, 1/A/2230:2233, 1/A/2245:2246, 1/A/2268:2269, 1/A/2414:2422 | No text annotation | homologous J5_4WF9_007 J5_39529.2 | |
| J5_7UNU_007 | 1/a/36:39, 1/a/397:400, 1/a/430:434, 1/a/491:494, 1/a/539:542 | No text annotation | homologous J5_5J7L_001 NA | |
| J5_7UNU_008 | 1/a/36:39, 1/a/397:400, 1/a/430:436, 1/a/486:494, 1/a/539:542 | No text annotation | homologous J5_5J7L_002 NA | |
| J5_7UNU_009 | 1/a/58:61, 1/a/100:107, 1/a/308:310, 1/a/331:333, 1/a/344:348 | No text annotation | homologous J5_4LFB_002 J5_58574.1 | |
| J6_7UNU_001 | 1/A/45:46, 1/A/179:183, 1/A/214:224, 1/A/231:235, 1/A/262:266, 1/A/417:424 | No text annotation | ||
| J6_7UNU_002 | 1/A/2061:2064, 1/A/2230:2233, 1/A/2245:2246, 1/A/2268:2271, 1/A/2371:2382, 1/A/2408:2422 | No text annotation | ||
| J7_7UNU_001 | 1/A/8:15, 1/A/516:522, 1/A/2005:2010, 1/A/2027:2030, 1/A/2612:2617, 1/A/2775:2776, 1/A/2881:2882 | No text annotation | ||
| J7_7UNU_002 | 1/A/807:812, 1/A/825:828, 1/A/930:936, 1/A/961:966, 1/A/977:981, 1/A/1154:1155, 1/A/1172:1177 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_7UNU_033 | No text annotation | ||
| J3_7UNU_013 | No text annotation | ||
| J3_7UNU_021 | No text annotation | ||
| J3_7UNU_023 | No text annotation | ||
| J4_7UNU_013 | No text annotation |
Coloring options: