HL_7UNU_062

3D structure

PDB id

7UNU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNU_062 not in the Motif Atlas

Geometric match to HL_4WF9_058

Geometric discrepancy: 0.1445

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

7UNU|1|A|C|2538
7UNU|1|A|OMU|2539
7UNU|1|A|G|2540
7UNU|1|A|U|2541
7UNU|1|A|U|2542
7UNU|1|A|C|2543
7UNU|1|A|G|2544

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain x

Translation initiation factor IF-2