HL_7UNV_051

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

7UNV|1|A|C|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNV_051 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1887

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.8

Basepair signature

cWW-F

Number of instances in this motif group

23

Unit IDs

7UNV|1|A|C|2130
7UNV|1|A|G|2131
7UNV|1|A|C|2132
7UNV|1|A|C|2133
7UNV|1|A|A|2134
7UNV|1|A|G|2135

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11