HL_7UNV_080

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

7UNV|1|a|A|338

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNV_080 not in the Motif Atlas

Homologous match to HL_4LFB_009

Geometric discrepancy: 0.1801

The information below is about HL_4LFB_009

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7UNV|1|a|C|336
7UNV|1|a|U|337
7UNV|1|a|A|338
7UNV|1|a|C|339
7UNV|1|a|G|340
7UNV|1|a|G|341

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L14

Chain R

50S ribosomal protein L19