HL_7UNV_083

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

7UNV|1|a|U|461

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNV_083 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.2279

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

7UNV|1|a|G|456
7UNV|1|a|U|457
7UNV|1|a|U|458
7UNV|1|a|A|459
7UNV|1|a|A|460
7UNV|1|a|U|461
7UNV|1|a|A|462
7UNV|1|a|C|463
7UNV|1|a|C|464

Current chains

Chain a

16S Ribosomal RNA

Nearby chains