HL_7UNV_102

3D structure

PDB id

7UNV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

G(2MG)G(MA6)(MA6)C

Length

6 nucleotides

Bulged bases

7UNV|1|a|G|1511

QA status

Modified nucleotides: 2MG, MA6

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNV_102 not in the Motif Atlas

Homologous match to HL_6CZR_103

Geometric discrepancy: 0.0908

The information below is about HL_6CZR_103

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.6

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7UNV|1|a|G|1509
7UNV|1|a|2MG|1510
7UNV|1|a|G|1511
7UNV|1|a|MA6|1512
7UNV|1|a|MA6|1513
7UNV|1|a|C|1514

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA