HL_7UNW_032
3D structure
- PDB id
- 7UNW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GUGAAAAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UNW_032 not in the Motif Atlas
- Geometric match to HL_5J7L_165
- Geometric discrepancy: 0.1242
- The information below is about HL_5J7L_165
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
7UNW|1|A|G|1268
7UNW|1|A|U|1269
7UNW|1|A|G|1270
7UNW|1|A|A|1271
7UNW|1|A|A|1272
7UNW|1|A|A|1273
7UNW|1|A|A|1274
7UNW|1|A|A|1275
7UNW|1|A|C|1276
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 4
- 50S ribosomal protein L32
- Chain P
- 50S ribosomal protein L17
- Chain U
- 50S ribosomal protein L22
Coloring options: