HL_7UNW_036

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGUUGGUUG

Length

9 nucleotides

Bulged bases

7UNW|1|A|U|1440, 7UNW|1|A|U|1441

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_036 not in the Motif Atlas

Geometric match to HL_5J7L_169

Geometric discrepancy: 0.0931

The information below is about HL_5J7L_169

Detailed Annotation

Mini UNCG with extended bulge

Broad Annotation

Mini UNCG with extended bulge

Motif group

HL_22622.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

7UNW|1|A|C|1438
7UNW|1|A|G|1439
7UNW|1|A|U|1440
7UNW|1|A|U|1441
7UNW|1|A|G|1442
7UNW|1|A|G|1443
7UNW|1|A|U|1444
7UNW|1|A|U|1445
7UNW|1|A|G|1446

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L17