HL_7UNW_053

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CUAAAGAGUAACG

Length

13 nucleotides

Bulged bases

7UNW|1|A|A|2255, 7UNW|1|A|C|2262

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_053 not in the Motif Atlas

Geometric match to HL_5J7L_187

Geometric discrepancy: 0.0714

The information below is about HL_5J7L_187

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

7UNW|1|A|C|2251
7UNW|1|A|U|2252
7UNW|1|A|A|2253
7UNW|1|A|A|2254
7UNW|1|A|A|2255
7UNW|1|A|G|2256
7UNW|1|A|A|2257
7UNW|1|A|G|2258
7UNW|1|A|U|2259
7UNW|1|A|A|2260
7UNW|1|A|A|2261
7UNW|1|A|C|2262
7UNW|1|A|G|2263

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain O

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27