HL_7UNW_094

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

7UNW|1|a|G|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_094 not in the Motif Atlas

Homologous match to HL_4LFB_025

Geometric discrepancy: 0.1412

The information below is about HL_4LFB_025

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

7UNW|1|a|G|1083
7UNW|1|a|U|1084
7UNW|1|a|U|1085
7UNW|1|a|A|1086
7UNW|1|a|A|1087
7UNW|1|a|G|1088
7UNW|1|a|U|1089
7UNW|1|a|C|1090

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain b

30S ribosomal protein S2

Chain g

30S ribosomal protein S7