HL_7UNW_099

3D structure

PDB id

7UNW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AAUCAGAAUGU

Length

11 nucleotides

Bulged bases

7UNW|1|a|U|1358

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UNW_099 not in the Motif Atlas

Homologous match to HL_4LFB_030

Geometric discrepancy: 0.1305

The information below is about HL_4LFB_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06226.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

7UNW|1|a|A|1350
7UNW|1|a|A|1351
7UNW|1|a|U|1352
7UNW|1|a|C|1353
7UNW|1|a|A|1354
7UNW|1|a|G|1355
7UNW|1|a|A|1356
7UNW|1|a|A|1357
7UNW|1|a|U|1358
7UNW|1|a|G|1359
7UNW|1|a|U|1360

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14