HL_7UO0_009
3D structure
- PDB id
- 7UO0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E.coli RNaseP Holoenzyme with Mg2+
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CAGUUGGUUAG
- Length
- 11 nucleotides
- Bulged bases
- 7UO0|1|C|A|14, 7UO0|1|C|G|15, 7UO0|1|C|U|16, 7UO0|1|C|U|17, 7UO0|1|C|G|18, 7UO0|1|C|G|19, 7UO0|1|C|U|20, 7UO0|1|C|U|21, 7UO0|1|C|A|22
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UO0_009 not in the Motif Atlas
- Geometric match to HL_8C3A_022
- Geometric discrepancy: 0.3437
- The information below is about HL_8C3A_022
- Detailed Annotation
- Externally structured
- Broad Annotation
- Externally structured
- Motif group
- HL_96426.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 4
Unit IDs
7UO0|1|C|C|13
7UO0|1|C|A|14
7UO0|1|C|G|15
7UO0|1|C|U|16
7UO0|1|C|U|17
7UO0|1|C|G|18
7UO0|1|C|G|19
7UO0|1|C|U|20
7UO0|1|C|U|21
7UO0|1|C|A|22
7UO0|1|C|G|23
Current chains
- Chain C
- Precursor tRNA substrate G(-1) G(-2)
Nearby chains
- Chain B
- Ribonuclease P class A; RNase P class A
Coloring options: