HL_7UOO_067
3D structure
- PDB id
- 7UOO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.34 Å
Loop
- Sequence
- UGAA(PSU)UGCAGAAUUCCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 7UOO|1|2|U|74, 7UOO|1|2|U|82, 7UOO|1|2|C|84, 7UOO|1|2|U|86
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7UOO|1|2|U|69
7UOO|1|2|G|70
7UOO|1|2|A|71
7UOO|1|2|A|72
7UOO|1|2|PSU|73
7UOO|1|2|U|74
7UOO|1|2|G|75
7UOO|1|2|C|76
7UOO|1|2|A|77
7UOO|1|2|G|78
7UOO|1|2|A|79
7UOO|1|2|A|80
7UOO|1|2|U|81
7UOO|1|2|U|82
7UOO|1|2|C|83
7UOO|1|2|C|84
7UOO|1|2|G|85
7UOO|1|2|U|86
7UOO|1|2|G|87
7UOO|1|2|A|88
7UOO|1|2|A|89
Current chains
- Chain 2
- 5.8S rRNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 4
- Probable metalloprotease ARX1
- Chain Y
- 60S ribosomal protein L26-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain h
- 60S ribosomal protein L35-A
- Chain j
- 60S ribosomal protein L37-A
- Chain l
- 60S ribosomal protein L39
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