#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 171-172-163-154-11
1 HL_9PN5_0749PN50.25544A4 5.8S rRNAU69G70A71A72PSU73U74G75C76A77G78A79A80C83G85G87A88A89cWWtSHtHSncWw
2 HL_9AXU_0729AXU0.000044 5.8S rRNAU77G78A79A80U81U82G83C84A85G86A87A88C91G93G95A96A97cWWtSHtHS
3 HL_8OI5_0728OI50.455444 5.8S rRNAU69G70A71A72U73U74G75C76A77G78A79A81U83G85G87A88A89ncWWtSHtHS

3D structures

Complete motif including flanking bases
SequenceCounts
UGAA(PSU)UGCAGAAUUCCGUGAA1
UGAAUUGCAGAAUUCCGUGAA1
UGAAUUGCAGAUAUUCGUGAA1
Non-Watson-Crick part of the motif
SequenceCounts
GAA(PSU)UGCAGAAUUCCGUGA1
GAAUUGCAGAAUUCCGUGA1
GAAUUGCAGAUAUUCGUGA1

Release history

Release4.10
Date2026-05-20
StatusUpdated, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-tSH-tHS-F-F-F-F-F-F-F-F-F-F-F
    Heat map statistics
    Min 0.26 | Avg 0.27 | Max 0.50
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