HL_7UPH_037

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

CAACCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UPH_037 not in the Motif Atlas

Geometric match to HL_6JQ6_004

Geometric discrepancy: 0.3796

The information below is about HL_6JQ6_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

7UPH|1|I|C|1725
7UPH|1|I|A|1726
7UPH|1|I|A|1727
7UPH|1|I|C|1728
7UPH|1|I|C|1729
7UPH|1|I|G|1730

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain T

50S ribosomal protein L15