HL_7UPH_059
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CGUAAUAG
- Length
- 8 nucleotides
- Bulged bases
- 7UPH|1|I|A|2589
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7UPH_059 not in the Motif Atlas
- Geometric match to HL_4WF9_004
- Geometric discrepancy: 0.3219
- The information below is about HL_4WF9_004
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
7UPH|1|I|C|2586
7UPH|1|I|G|2587
7UPH|1|I|U|2588
7UPH|1|I|A|2589
7UPH|1|I|A|2590
7UPH|1|I|U|2591
7UPH|1|I|A|2592
7UPH|1|I|G|2593
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain O
- 50S ribosomal protein L6
- Chain m
- 50S ribosomal protein L36
Coloring options: