HL_7UPH_092

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UPH_092 not in the Motif Atlas

Geometric match to HL_5TBW_063

Geometric discrepancy: 0.2439

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7UPH|1|I|C|4045
7UPH|1|I|OMU|4046
7UPH|1|I|G|4047
7UPH|1|I|U|4048
7UPH|1|I|U|4049
7UPH|1|I|C|4050
7UPH|1|I|G|4051

Current chains

Chain I

Tethered rRNA

Nearby chains