HL_7UPH_103

3D structure

PDB id

7UPH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a ribosome with tethered subunits

Experimental method

ELECTRON MICROSCOPY

Resolution

4.18 Å

Loop

Sequence

CAGCGGUCCGGCCGG

Length

15 nucleotides

Bulged bases

7UPH|1|I|C|1135, 7UPH|1|I|C|1136

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7UPH|1|I|C|1128
7UPH|1|I|A|1129
7UPH|1|I|G|1130
7UPH|1|I|C|1131
7UPH|1|I|G|1132
7UPH|1|I|G|1133
7UPH|1|I|U|1134
7UPH|1|I|C|1135
7UPH|1|I|C|1136
7UPH|1|I|G|1137
7UPH|1|I|G|1138
7UPH|1|I|C|1139
7UPH|1|I|C|1140
7UPH|1|I|G|1141
7UPH|1|I|G|1142

Current chains

Chain I

Tethered rRNA

Nearby chains

Chain d

30S ribosomal protein S9