HL_7UVV_002

3D structure

PDB id

7UVV (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GCGGCAAAUAUC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVV_002 not in the Motif Atlas

Homologous match to HL_7A0S_002

Geometric discrepancy: 0.5738

The information below is about HL_7A0S_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76590.1

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7UVV|1|A|G|93
7UVV|1|A|C|94
7UVV|1|A|G|95
7UVV|1|A|G|96
7UVV|1|A|C|97
7UVV|1|A|A|98
7UVV|1|A|A|99
7UVV|1|A|A|100
7UVV|1|A|U|101
7UVV|1|A|A|102
7UVV|1|A|U|103
7UVV|1|A|C|104

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain S

50S ribosomal protein L23

Chain T

50S ribosomal protein L24

Chain X

50S ribosomal protein L29