Motif HL_76590.1 Version HL_76590.1 of this group appears in releases 4.1 to 4.15
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 7-8 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_7JRT_004 | 7JRT | 0.2943 | 0 | B | RNA nano bracelet | G | 102 | A | 103 | A | 104 | G | 105 | C | 106 | C | 107 | U | 108 | C | 109 | C | 110 | A | 111 | C | 112 | cWW | ||
| 2 | HL_7JRS_004 | 7JRS | 0.0000 | 0 | A | RNA 3D nanocage | G | 63 | A | 64 | A | 65 | G | 66 | C | 67 | A | 68 | G | 69 | G | 70 | C | 71 | A | 72 | C | 73 | ncWW | tWW | |
| 3 | HL_7A0S_002 | 7A0S | 0.7273 | 0 | X | LSU rRNA | C | 85 | U | 86 | G | 87 | G | 88 | A | 89 | G | 90 | A | 91 | U | 92 | A | 93 | C | 94 | G | 95 | cWW | ncWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAAGCCUCCAC | 1 |
| GAAGCAGGCAC | 1 |
| CUGGAGAUACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AAGCCUCCA | 1 |
| AAGCAGGCA | 1 |
| UGGAGAUAC | 1 |
Release history
| Release | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 | 4.10 | 4.11 | 4.12 | 4.13 | 4.14 | 4.15 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 | 2026-05-20 | 2026-06-17 | 2026-07-15 | 2026-08-12 | 2026-09-09 | 2026-10-07 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Heat map statistics
- Min 0.29 | Avg 0.40 | Max 0.76
Coloring options: