HL_7UVW_016

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

CUUCGUG

Length

7 nucleotides

Bulged bases

7UVW|1|A|U|544, 7UVW|1|A|U|547

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_016 not in the Motif Atlas

Geometric match to HL_4V9F_005

Geometric discrepancy: 0.2079

The information below is about HL_4V9F_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

9

Unit IDs

7UVW|1|A|C|542
7UVW|1|A|U|543
7UVW|1|A|U|544
7UVW|1|A|C|545
7UVW|1|A|G|546
7UVW|1|A|U|547
7UVW|1|A|G|548

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain I

50S ribosomal protein L13

Chain Q

50S ribosomal protein L21