HL_7UVW_046

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

7UVW|1|A|U|1951

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_046 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.0844

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

7UVW|1|A|G|1945
7UVW|1|A|G|1946
7UVW|1|A|U|1947
7UVW|1|A|A|1948
7UVW|1|A|A|1949
7UVW|1|A|G|1950
7UVW|1|A|U|1951
7UVW|1|A|U|1952
7UVW|1|A|C|1953

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain J

50S ribosomal protein L14

Chain a

Small subunit ribosomal RNA; SSU rRNA