HL_7UVW_107

3D structure

PDB id

7UVW (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.37 Å

Loop

Sequence

GUCGGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVW_107 not in the Motif Atlas

Homologous match to HL_9DFE_198

Geometric discrepancy: 0.1699

The information below is about HL_9DFE_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_02452.1

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

8

Unit IDs

7UVW|1|A|G|2300
7UVW|1|A|U|2301
7UVW|1|A|C|2302
7UVW|1|A|G|2303
7UVW|1|A|G|2304
7UVW|1|A|A|2305
7UVW|1|A|A|2306
7UVW|1|A|A|2307
7UVW|1|A|U|2308

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L5