HL_7UVY_056

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

UGUAUGGAAG

Length

10 nucleotides

Bulged bases

7UVY|1|A|U|2402

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVY_056 not in the Motif Atlas

Homologous match to HL_5J7L_192

Geometric discrepancy: 0.0583

The information below is about HL_5J7L_192

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53454.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

7UVY|1|A|U|2400
7UVY|1|A|G|2401
7UVY|1|A|U|2402
7UVY|1|A|A|2403
7UVY|1|A|U|2404
7UVY|1|A|G|2405
7UVY|1|A|G|2406
7UVY|1|A|A|2407
7UVY|1|A|A|2408
7UVY|1|A|G|2409

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L15