HL_7UVY_063

3D structure

PDB id

7UVY (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.39 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7UVY|1|A|G|2747, 7UVY|1|A|C|2751

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVY_063 not in the Motif Atlas

Homologous match to HL_5J7L_199

Geometric discrepancy: 0.0895

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7UVY|1|A|C|2741
7UVY|1|A|U|2742
7UVY|1|A|G|2743
7UVY|1|A|A|2744
7UVY|1|A|A|2745
7UVY|1|A|A|2746
7UVY|1|A|G|2747
7UVY|1|A|C|2748
7UVY|1|A|A|2749
7UVY|1|A|U|2750
7UVY|1|A|C|2751
7UVY|1|A|U|2752
7UVY|1|A|A|2753
7UVY|1|A|A|2754
7UVY|1|A|G|2755

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain G

50S ribosomal protein L6