HL_7UVZ_009

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

CUGGGAAG

Length

8 nucleotides

Bulged bases

7UVZ|1|A|A|313

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVZ_009 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.096

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_13999.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

23

Unit IDs

7UVZ|1|A|C|307
7UVZ|1|A|U|308
7UVZ|1|A|G|309
7UVZ|1|A|G|310
7UVZ|1|A|G|311
7UVZ|1|A|A|312
7UVZ|1|A|A|313
7UVZ|1|A|G|314

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L24