HL_7UVZ_074

3D structure

PDB id

7UVZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.21 Å

Loop

Sequence

GGUAAAGGC

Length

9 nucleotides

Bulged bases

7UVZ|1|a|G|262

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7UVZ_074 not in the Motif Atlas

Homologous match to HL_5J7L_006

Geometric discrepancy: 0.1249

The information below is about HL_5J7L_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

7UVZ|1|a|G|255
7UVZ|1|a|G|256
7UVZ|1|a|U|257
7UVZ|1|a|A|258
7UVZ|1|a|A|259
7UVZ|1|a|A|260
7UVZ|1|a|G|261
7UVZ|1|a|G|262
7UVZ|1|a|C|263

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain q

30S ribosomal protein S17

Chain t

30S ribosomal protein S20